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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs9369289 chr6:41527895 G/A 2.99E-7 483 15.2 17.67 17.23 KM Plot
THCA rs937290 chr1:45961955 A/G 4.28E-5 486 10.4 16.07 16.98 KM Plot
THCA rs9394809 chr6:41548671 A/T 2.72E-6 480 15.17 17.7 17.02 KM Plot
THCA rs9406546 chr9:15853542 G/A 3.14E-5 489 7.3 16.57 15.83 KM Plot
THCA rs941353 chr2:54577332 A/G 0.000262 486 21.02 15.27 15.9 KM Plot
THCA rs9423495 chr10:3180759 A/G 0.00026 490 10.8 14.78 16.07 KM Plot
THCA rs9423706 chr10:3200621 A/G 0.000316 485 16.13 14.78 10.8 KM Plot
THCA rs942812 chr10:100153664 C/A 5.19E-6 487 15.97 16.15 13.07 KM Plot
THCA rs9428124 chr1:119111520 G/T 7.53E-5 476 13.97 16.3 15.77 KM Plot
THCA rs9429277 chr1:16272409 C/T 0.000182 487 15.3 17.53 17.77 KM Plot
THCA rs9429280 chr1:16295599 G/A 1.55E-11 486 15.23 17.93 12.63 KM Plot
THCA rs9439033 chr1:41526023 C/T 2.77E-7 490 14.9 17.75 17.47 KM Plot
THCA rs9439035 chr1:41540265 T/C 3.61E-12 489 17.7 17.75 14.93 KM Plot
THCA rs945179 chr1:45992460 A/G 6.65E-5 490 16.97 16.18 10.8 KM Plot
THCA rs9463179 chr6:46070310 T/A 5.57E-5 487 15.77 16.77 17.77 KM Plot